Release v1.0.0-beta.1 Pre-release#

Release Date: July 28, 2025

📦 Installation#

pip install corneto==v1.0.0-beta.1

📖 Documentation#

What’s Changed#

📦 Other Changes#

  • little adjustments for dependency management by @deeenes in https://github.com/saezlab/corneto/pull/11

  • post r1 improvements 1.0.0.dev5 by @pablormier in https://github.com/saezlab/corneto/pull/15

  • add back old functions from graph class by @pablormier in https://github.com/saezlab/corneto/pull/16

  • corneto.org landing page by @pablormier in https://github.com/saezlab/corneto/pull/19

  • dev7 version by @pablormier in https://github.com/saezlab/corneto/pull/20

  • search switcher.json in root by @pablormier in https://github.com/saezlab/corneto/pull/21

  • add dynamic versioning by @pablormier in https://github.com/saezlab/corneto/pull/22

  • improve version detection by @pablormier in https://github.com/saezlab/corneto/pull/23

  • docs: CARNIVAL multi-condition tutorial using bulk RNAseq (Irene Rigato) by @ireriga in https://github.com/saezlab/corneto/pull/25

  • Fixes bigm_constraints multisample imat by @Bisho2122 in https://github.com/saezlab/corneto/pull/27

  • Improvement documentation, new tutorials and new options for the carnival method by @pablormier in https://github.com/saezlab/corneto/pull/28

  • fix: pcst rooted version (closes #29) by @pablormier in https://github.com/saezlab/corneto/pull/30

  • preparation for v1.0.0-b0 by @pablormier in https://github.com/saezlab/corneto/pull/31

  • docs: update deps, benchmarks and readme by @pablormier in https://github.com/saezlab/corneto/pull/32

  • improve iMAT bound handling and flow constraints by @pablormier in https://github.com/saezlab/corneto/pull/39

  • improve pyproject.toml by @pablormier in https://github.com/saezlab/corneto/pull/40

  • improve automation for docs and tutorials by @pablormier in https://github.com/saezlab/corneto/pull/41

  • improve automation and docs by @pablormier in https://github.com/saezlab/corneto/pull/42

New Contributors#

  • @deeenes made their first contribution in https://github.com/saezlab/corneto/pull/11

  • @pablormier made their first contribution in https://github.com/saezlab/corneto/pull/15

  • @ireriga made their first contribution in https://github.com/saezlab/corneto/pull/25

  • @Bisho2122 made their first contribution in https://github.com/saezlab/corneto/pull/27

Full Changelog: https://github.com/saezlab/corneto/compare/0.9.1-alpha.5…v1.0.0-beta.1

Installation#

pip install corneto==1.0.0-beta.1