Metabolism

CORNETO supports flux balance analysis workflows while adding modeling flexibility to define custom constraints, objectives, and coupled formulations in a single optimization problem. For users familiar with COBRA-style modeling, this enables extension from standard FBA to explicit use cases such as multi-condition FBA and integration of omics data into metabolic networks to detect stoichiometrically consistent steady-state metabolic states.

• Flux Balance Analysis (FBA)
  • What is FBA?
  • FBA with CORNETO
  • Using COBRApy
  • Using CORNETO
  • Sparse FBA
• Multi-condition sparse FBA
• Context-specific models (iMAT)
• Multi-condition iMAT